Emerging investigator series: predicted losses of sulfur and selenium in european soils using machine learning: a call for prudent model interrogation and selection

  • Gerrad D. Jones*
  • , Logan Insinga
  • , Boris Droz
  • , Aryeh Feinberg
  • , Andrea Stenke
  • , Jo Smith
  • , Pete Smith
  • , Lenny H.E. Winkel
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

1 Citation (Scopus)

Abstract

Reductions in sulfur (S) atmospheric deposition in recent decades have been attributed to S deficiencies in crops. Similarly, global soil selenium (Se) concentrations were predicted to drop, particularly in Europe, due to increases in leaching attributed to increases in aridity. Given its international importance in agriculture, reductions of essential elements, including S and Se, in European soils could have important impacts on nutrition and human health. Our objectives were to model current soil S and Se levels in Europe and predict concentration changes for the 21st century. We interrogated four machine-learning (ML) techniques, but after critical evaluation, only outputs for linear support vector regression (Lin-SVR) models for S and Se and the multilayer perceptron model (MLP) for Se were consistent with known mechanisms reported in literature. Other models exhibited overfitting even when differences in training and testing performance were low or non-existent. Furthermore, our results highlight that similarly performing models based on RMSE or R2 can lead to drastically different predictions and conclusions, thus highlighting the need to interrogate machine learning models and to ensure they are consistent with known mechanisms reported in the literature. Both elements exhibited similar spatial patterns with predicted gains in Scandinavia versus losses in the central and Mediterranean regions of Europe, respectively, by the end of the 21st century for an extreme climate scenario. The median change was −5.5% for S (Lin-SVR) and −3.5% (MLP) and −4.0% (Lin-SVR) for Se. For both elements, modeled losses were driven by decreases in soil organic carbon, S and Se atmospheric deposition, and gains were driven by increases in evapotranspiration.

Original languageEnglish
Pages (from-to)1503-1515
Number of pages13
JournalEnvironmental Science: Processes and Impacts
Volume26
Issue number9
Early online date5 Aug 2024
DOIs
Publication statusPublished - 1 Sept 2024

Bibliographical note

We acknowledge that Oregon State University in Corvallis, Oregon, is located within the traditional homelands of the Marys River or the Ampinefu Band of Kalapuya. Following the Willamette Valley Treaty of 1855, Kalapuya people were forcibly removed to reservations in Western Oregon. Today, living descendants of these people are a part of the Confederated Tribes of Grand Ronde Community of Oregon and the Confederated tribes of the Siletz Indians. We acknowledge Lara Cayo for assistance with an early version of this manuscript, and Sonia Seneviratne and Martin Hirschi for contributing climate data.

Data Availability Statement

The open-source annotated updated Python-code with a description on usage is available on GitHub (https://github.com/EcoChem-OSU/) and the specific version used in this paper is available in Zenodo (https://doi.org/10.5281/zenodo.12695649).

Funding

This work was supported by Oregon State University-Agricultural Research Service (#9048A), Swiss National Science Foundation Grants PP00P2_133619 and PP00P2_163747, and Eawag, the Swiss Federal Institute of Aquatic Science and Technology.

FundersFunder number
Oregon State University9048A
Swiss National Science FoundationPP00P2_133619, PP00P2_163747

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