A hybrid neural ordinary differential equation model of the cardiovascular system

Gevik Grigorian*, Sandip V. George, Sam Lishak, Rebecca J. Shipley, Simon Arridge

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

In the human cardiovascular system (CVS), the interaction between the left and right ventricles of the heart is influenced by the septum and the pericardium. Computational models of the CVS can capture this interaction, but this often involves approximating solutions to complex nonlinear equations numerically. As a result, numerous models have been proposed, where these nonlinear equations are either simplified, or ventricular interaction is ignored. In this work, we propose an alternative approach to modelling ventricular interaction, using a hybrid neural ordinary differential equation (ODE) structure. First, a lumped parameter ODE model of the CVS (including a Newton-Raphson procedure as the numerical solver) is simulated to generate synthetic time-series data. Next, a hybrid neural ODE based on the same model is constructed, where ventricular interaction is instead set to be governed by a neural network. We use a short range of the synthetic data (with various amounts of added measurement noise) to train the hybrid neural ODE model. Symbolic regression is used to convert the neural network into analytic expressions, resulting in a partially learned mechanistic model. This approach was able to recover parsimonious functions with good predictive capabilities and was robust to measurement noise.

Original languageEnglish
Article number20230710
Number of pages15
JournalJournal of the Royal Society Interface
Volume21
Issue number212
DOIs
Publication statusPublished - 20 Mar 2024

Data Availability Statement

The code developed for this work is available from the Zenodo digital repository: https://doi.org/10.5281/zenodo.10679484 [37].

Keywords

  • cardiovascular system
  • neural network
  • ordinary differential equations
  • symbolic regression
  • time series

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