Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis

Eva Møller  Nielsen; Jonas T.  Björkman; Kristoffer Kiil; Kathie  Grant; Tim Dallman; Anaïs  Painset; Corinne  Amar; Sophie  Roussel; Laurent  Guillier; Benjamin  Félix; Ovidiu Rotariu; Francisco Jose Perez-Reche; Ken Forbes; Norval Strachan

doi:10.2903/sp.efsa.2017.EN-1151

Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis

Eva Møller Nielsen, Jonas T. Björkman, Kristoffer Kiil, Kathie Grant, Tim Dallman, Anaïs Painset, Corinne Amar, Sophie Roussel, Laurent Guillier, Benjamin Félix, Ovidiu Rotariu, Francisco Jose Perez-Reche, Ken Forbes, Norval Strachan

Research output: Contribution to specialist publication › Article

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Original language	English
Pages	1151E
Volume	14
No.	2
Specialist publication	EFSA Supporting Publications
DOIs	https://doi.org/10.2903/sp.efsa.2017.EN-1151
Publication status	Published - Feb 2017

Bibliographical note

We would like to thank all the persons and institutes that have provided the project with isolates and
accompanying information. Without them, this project would not have been possible.
Lin Cathrine T. Brandal, Norwegian Institute of Public Health, Norway
Julio Vázquez Moreno and Raquel Abad Torreblanca, Instituto de Salud Carlos III, Spain
Marc Lecuit, Institut Pasteur, France
Alexandre Leclercq, Institut Pasteur, France
Iva Hristova, National Center of Infectious and Parasitic Diseases, Bulgaria
Marija Trkov, National Laboratory of Health, Environment and Food, Slovenia
Cecilia Jernberg, Public Health Agency of Sweden, Sweden
Ariane Pietzka, Austrian Agency for Health and Food Safety, Austria
Eelco Franz and Ingrid Friesema, RIVM, The Netherlands
Carlo Spanu, University of Sassari Sardinia
Ifip, French Institute for Pig and Pork Industry, Maisons-Alfort, France
All the NRLs for providing the isolates from the EU baseline study
Special thanks to Sylvain Brisse and Alexandra Moura, Institut Pasteur, France, for providing cgMLST
data.
The authors would also like to thank the EFSA staff members: Maria Teresa da Silva Felicio, Beatriz
Guerra, Ernesto Lìebana and Valentina Rizzi as well as the members of the Working Group on Listeria
monocytogenes contamination of ready-to-eat foods: Kostas Koutsoumanis, Roland Lindqvist, Moez
Sanaa, Panagiotis Skandamis, Niko Speybroek, Johanna Takkinen and Martin Wagner for the support,
revisions and suggestions during the development of the present procurement activity and report.

Keywords

listeria monocytogenes
Whole genome sequencing
genetic diversity
phylogeny
food
human

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysisFinal published version, 48.5 MBLicence: Unspecified

Cite this

Nielsen, E. M., Björkman, J. T., Kiil, K., Grant, K., Dallman, T., Painset, A., Amar, C., Roussel, S., Guillier, L., Félix, B., Rotariu, O., Perez-Reche, F. J., Forbes, K., & Strachan, N. (2017). Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis. EFSA Supporting Publications, 14(2), 1151E. https://doi.org/10.2903/sp.efsa.2017.EN-1151

Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis. / Nielsen, Eva Møller ; Björkman, Jonas T. ; Kiil, Kristoffer et al.
In: EFSA Supporting Publications, Vol. 14, No. 2, 02.2017, p. 1151E.

Research output: Contribution to specialist publication › Article

Nielsen, EM, Björkman, JT, Kiil, K, Grant, K, Dallman, T, Painset, A, Amar, C, Roussel, S, Guillier, L, Félix, B, Rotariu, O , Perez-Reche, FJ, Forbes, K & Strachan, N 2017, 'Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis' EFSA Supporting Publications, vol. 14, no. 2, pp. 1151E. https://doi.org/10.2903/sp.efsa.2017.EN-1151

Nielsen EM, Björkman JT, Kiil K, Grant K, Dallman T, Painset A et al. Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis. EFSA Supporting Publications. 2017 Feb;14(2):1151E. Epub 2017 Feb 23. doi: 10.2903/sp.efsa.2017.EN-1151

Nielsen, Eva Møller ; Björkman, Jonas T. ; Kiil, Kristoffer et al. / Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods : activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis. In: EFSA Supporting Publications. 2017 ; Vol. 14, No. 2. pp. 1151E.

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