Connecting the multiple dimensions of global soil fungal diversity

Vladimir Mikryukov; Olesya Dulya; Alexander Zizka; Mohammad Bahram; Niloufar Hagh-Doust; Sten Anslan; Oleh Prylutskyi; Manuel Delgado-Baquerizo; Fernando T. Maestre; Henrik Nilsson; Jaan Pärn; Maarja Öpik; Mari Moora; Martin Zobel; Mikk Espenberg; Ülo Mander; Abdul Nasir Khalid; Adriana Corrales; Ahto Agan; Aída M. Vasco-Palacios; Alessandro Saitta; Andrea Rinaldi; Annemieke Verbeken; Bobby Sulistyo; Boris Tamgnoue; Brendan Furneaux; Camila Duarte Ritter; Casper Nyamukondiwa; Cathy Sharp; César Marín; Daniyal Gohar; Darta Klavina; Dipon Sharmah; Dong Qin Dai; Eduardo Nouhra; Elisabeth Machteld Biersma; Elisabeth Rähn; Erin Cameron; Eske De Crop; Eveli Otsing; Evgeny Davydov; Felipe Albornoz; Francis Brearley; Franz Buegger; Geoffrey Zahn; Gregory Bonito; Inga Hiiesalu; Isabel Barrio; Jacob Heilmann-Clausen; Jelena Ankuda; Jiri Doležal; John Kupagme; Jose Maciá-Vicente; Joseph Djeugap Fovo; József Geml; Juha Alatalo; Julieta Alvarez-Manjarrez; Kadri Põldmaa; Kadri Runnel; Kalev Adamson; Kari Anne Bråthen; Karin Pritsch; Kassim Tchan Issifou; Kęstutis Armolaitis; Kevin Hyde; Kevin K. Newsham; Kristel Panksep; Adebola Azeez Lateef; Linda Hansson; Louis Lamit; Malka Saba; Maria Tuomi; Marieka Gryzenhout; Marijn Bauters; Meike Piepenbring; Nalin N. Wijayawardene; Nourou Yorou; Olavi Kurina; Peter Mortimer; Peter Meidl; Petr Kohout; Rasmus Puusepp; Rein Drenkhan; Roberto Garibay-Orijel; Roberto Godoy; Saad Alkahtani; Saleh Rahimlou; Sergey Dudov; Sergei Põlme; Soumya Ghosh; Sunil Mundra; Talaat Ahmed; Tarquin Netherway; Terry Henkel; Tomas Roslin; Vincent Nteziryayo; Vladimir Fedosov; Vladimir Onipchenko; Weeragalle Arachchillage Erandi Yasanthika; Young Lim; Michael Van Nuland; Nadejda Soudzilovskaia; Alexandre Antonelli; Urmas Kõljalg; Kessy Abarenkov; Leho Tedersoo

doi:10.1126/sciadv.adj8016

Connecting the multiple dimensions of global soil fungal diversity

Vladimir Mikryukov^* (Corresponding Author), Olesya Dulya, Alexander Zizka, Mohammad Bahram, Niloufar Hagh-Doust, Sten Anslan, Oleh Prylutskyi, Manuel Delgado-Baquerizo, Fernando T. Maestre, Henrik Nilsson, Jaan Pärn, Maarja Öpik, Mari Moora, Martin Zobel, Mikk Espenberg, Ülo Mander, Abdul Nasir Khalid, Adriana Corrales, Ahto Agan, Aída M. Vasco-PalaciosAlessandro Saitta, Andrea Rinaldi, Annemieke Verbeken, Bobby Sulistyo, Boris Tamgnoue, Brendan Furneaux, Camila Duarte Ritter, Casper Nyamukondiwa, Cathy Sharp, César Marín, Daniyal Gohar, Darta Klavina, Dipon Sharmah, Dong Qin Dai, Eduardo Nouhra, Elisabeth Machteld Biersma, Elisabeth Rähn, Erin Cameron, Eske De Crop, Eveli Otsing, Evgeny Davydov, Felipe Albornoz, Francis Brearley, Franz Buegger, Geoffrey Zahn, Gregory Bonito, Inga Hiiesalu, Isabel Barrio, Jacob Heilmann-Clausen, Jelena Ankuda, Jiri Doležal, John Kupagme, Jose Maciá-Vicente, Joseph Djeugap Fovo, József Geml, Juha Alatalo, Julieta Alvarez-Manjarrez, Kadri Põldmaa, Kadri Runnel, Kalev Adamson, Kari Anne Bråthen, Karin Pritsch, Kassim Tchan Issifou, Kęstutis Armolaitis, Kevin Hyde, Kevin K. Newsham, Kristel Panksep, Adebola Azeez Lateef, Linda Hansson, Louis Lamit, Malka Saba, Maria Tuomi, Marieka Gryzenhout, Marijn Bauters, Meike Piepenbring, Nalin N. Wijayawardene, Nourou Yorou, Olavi Kurina, Peter Mortimer, Peter Meidl, Petr Kohout, Rasmus Puusepp, Rein Drenkhan, Roberto Garibay-Orijel, Roberto Godoy, Saad Alkahtani, Saleh Rahimlou, Sergey Dudov, Sergei Põlme, Soumya Ghosh, Sunil Mundra, Talaat Ahmed, Tarquin Netherway, Terry Henkel, Tomas Roslin, Vincent Nteziryayo, Vladimir Fedosov, Vladimir Onipchenko, Weeragalle Arachchillage Erandi Yasanthika, Young Lim, Michael Van Nuland, Nadejda Soudzilovskaia, Alexandre Antonelli, Urmas Kõljalg, Kessy Abarenkov, Leho Tedersoo^* (Corresponding Author)

^*Corresponding author for this work

Aberdeen Centre For Environmental Sustainability

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Abstract

How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.

Original language	English
Article number	eadj8016
Number of pages	15
Journal	Science Advances
Volume	9
Issue number	48
Early online date	29 Nov 2023
DOIs	https://doi.org/10.1126/sciadv.adj8016
Publication status	Published - 1 Dec 2023

Data Availability Statement

All data needed to evaluate the conclusions in the paper are present in the paper and/or the Supplementary Materials. Additional data used in this article and the generated gridded maps are available through ZenodoDOI:10.5281/zenodo.8013448.The code used for data analysis and visualization of the main results of the study is available at GitHub:https://github.com/Mycology-Microbiology-Center/Global_fungal_diversity (DOI: 10.5281/zenodo.8407259).Additional details on the GSM care available at https://GSMc-fungi.github.io/(DOI:10.5281/zenodo.10003080).FungalDNA sequences and OTU occurrences can be accessed from the PlutoF biodiversity data management platform. The raw sequence data generated in this study are deposited in the European Nucleotide Archive (ENA) at EMBL-EBIunderaccessionnumberPRJEB63550 (StudyID ERP148695,run accessionsERR11608487–ERR11609485andERR11609494–ERR11613474).All soil samples collected are preserved in the University of Tartu Natural History Museum’s collection of DNA and environmental samples.

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Mikryukov, V., Dulya, O., Zizka, A., Bahram, M., Hagh-Doust, N., Anslan, S., Prylutskyi, O., Delgado-Baquerizo, M., Maestre, F. T., Nilsson, H., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., ... Tedersoo, L. (2023). Connecting the multiple dimensions of global soil fungal diversity. Science Advances, 9(48), Article eadj8016. https://doi.org/10.1126/sciadv.adj8016

Mikryukov, V, Dulya, O, Zizka, A, Bahram, M, Hagh-Doust, N, Anslan, S, Prylutskyi, O, Delgado-Baquerizo, M, Maestre, FT, Nilsson, H, Pärn, J, Öpik, M, Moora, M, Zobel, M, Espenberg, M, Mander, Ü, Khalid, AN, Corrales, A, Agan, A, Vasco-Palacios, AM, Saitta, A, Rinaldi, A, Verbeken, A, Sulistyo, B, Tamgnoue, B, Furneaux, B, Ritter, CD, Nyamukondiwa, C, Sharp, C, Marín, C, Gohar, D, Klavina, D, Sharmah, D, Dai, DQ, Nouhra, E, Biersma, EM, Rähn, E, Cameron, E, De Crop, E, Otsing, E, Davydov, E, Albornoz, F, Brearley, F, Buegger, F, Zahn, G, Bonito, G, Hiiesalu, I, Barrio, I, Heilmann-Clausen, J, Ankuda, J, Doležal, J, Kupagme, J, Maciá-Vicente, J, Fovo, JD, Geml, J, Alatalo, J, Alvarez-Manjarrez, J, Põldmaa, K, Runnel, K, Adamson, K, Bråthen, KA, Pritsch, K, Issifou, KT, Armolaitis, K, Hyde, K, Newsham, KK, Panksep, K, Lateef, AA, Hansson, L, Lamit, L, Saba, M, Tuomi, M, Gryzenhout, M, Bauters, M, Piepenbring, M, Wijayawardene, NN, Yorou, N, Kurina, O, Mortimer, P, Meidl, P, Kohout, P, Puusepp, R, Drenkhan, R, Garibay-Orijel, R, Godoy, R, Alkahtani, S, Rahimlou, S, Dudov, S, Põlme, S, Ghosh, S, Mundra, S, Ahmed, T, Netherway, T, Henkel, T, Roslin, T, Nteziryayo, V, Fedosov, V, Onipchenko, V, Yasanthika, WAE, Lim, Y, Van Nuland, M, Soudzilovskaia, N, Antonelli, A, Kõljalg, U, Abarenkov, K & Tedersoo, L 2023, 'Connecting the multiple dimensions of global soil fungal diversity', Science Advances, vol. 9, no. 48, eadj8016. https://doi.org/10.1126/sciadv.adj8016

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AU - Prylutskyi, Oleh

AU - Delgado-Baquerizo, Manuel

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AU - Nilsson, Henrik

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AU - Sharp, Cathy

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AU - Gohar, Daniyal

AU - Klavina, Darta

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AU - Nouhra, Eduardo

AU - Biersma, Elisabeth Machteld

AU - Rähn, Elisabeth

AU - Cameron, Erin

AU - De Crop, Eske

AU - Otsing, Eveli

AU - Davydov, Evgeny

AU - Albornoz, Felipe

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AU - Buegger, Franz

AU - Zahn, Geoffrey

AU - Bonito, Gregory

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AU - Barrio, Isabel

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AU - Drenkhan, Rein

AU - Garibay-Orijel, Roberto

AU - Godoy, Roberto

AU - Alkahtani, Saad

AU - Rahimlou, Saleh

AU - Dudov, Sergey

AU - Põlme, Sergei

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AU - Mundra, Sunil

AU - Ahmed, Talaat

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AU - Henkel, Terry

AU - Roslin, Tomas

AU - Nteziryayo, Vincent

AU - Fedosov, Vladimir

AU - Onipchenko, Vladimir

AU - Yasanthika, Weeragalle Arachchillage Erandi

AU - Lim, Young

AU - Van Nuland, Michael

AU - Soudzilovskaia, Nadejda

AU - Antonelli, Alexandre

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Connecting the multiple dimensions of global soil fungal diversity

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