Crystal structures and Hirshfeld surface analyses of a des-A-B-aromatic steroidal compound, and two of its derivatives, having a trans-2,3,4,5-tetrahydro-3a-methyl-7-methoxybenz[e]indane skeleton-structural comparisons with reported tetrahydrobenz[e]indene derivatives

Ligia R. Gomes, John N. Low, Alan B. Turner, Alexander W. Nowicki, Thomas C. Baddeley, James L. Wardell* (Corresponding Author)

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

The crystal structures and Hirshfeld surface analyses of the des-A-B-aromatic steroid derivative, (3a,9b)-1,2,3a,4,5,9b-hexahydro-7-methoxy-3a-methyl-3H-benz[e]-inden-3-one (or 5-methoxy-des-A-estra-5,7,9-triene-17-one) 1, its acetohydrazide derivative, 2, and its hydrazone derivative, 3, are reported. All three compounds crystallize in chiral space groups: compounds 1 and 2 in the orthorhombic space group P212121 each with one molecule in the asymmetric unit, and compound 3 in the monoclinic space group P21 with two similar but independent molecules, Mol A and Mol B, in the asymmetric unit. Both the five-membered and six-membered non-aromatic rings in all three compounds have envelope or near envelope shapes. In compounds 2 and 3 the N=N units have (E)-arrangements. The intermolecular interactions in crystals of compound 1 are C-H · · · O hydrogen bonds and C-H · · · πinteractions, in compound 2 N-H · · · O and C-H · · · O hydrogen bonds and C-H · · · πinteractions are present, while in compound 3 there are just C-H · · · πinteractions. An important substructure in 1 is a sheet of molecules, composed of R66(44) rings, formed from C-H · · · O(methoxy) and C-H · · · O(carbonyl) hydrogen bonds, the molecules of which form columns linked via the B and D rings, i.e. in a head-to-tail fashion. Compound 2 is an acylhydrazonyl compound, in which the two independent molecules are linked into asymmetric dimers via strong classical N-H · · · O hydrogen bonds, with the formation of R22(8) rings. In both 1 and 2, further intermolecular interactions result in 3-dimensional structures, while compound 3 has a 1-dimensional structure arising from C-H · · · O interactions generating spiral chains. The results have been compared with existing data.

Original languageEnglish
Pages (from-to)649-663
Number of pages15
JournalZeitschrift fur Naturforschung - Section B Journal of Chemical Sciences
Volume74
Issue number9
DOIs
Publication statusPublished - 22 Aug 2019

Bibliographical note

The authors thank the National Crystallographic Service, University of Southampton, for the data collection, and for their help and advice. This work was supported by the Portuguese Foundation for Science and Technology (FCT) UID/Multi/04546/2013.

Data Availability Statement

No data availability statement

Keywords

  • 3H-benz[e]-inden-3-ones
  • crystal structures
  • des-A-B-aromatic steroids
  • des-A-estra-5,7,9-triene-17-ones

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