First genetic data for the critically endangered Cuban endemic Zapata Rail Cyanolimnas cerverai, and the taxonomic implications

Alex F. Brown, Yvonne Lawrie, Thomas J. Shannon, J. Martin Collinson, Guy M. Kirwan* (Corresponding Author), Arturo Kirkconnell, Martin Stervander* (Corresponding Author)

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

2 Citations (Scopus)
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Abstract

The taxonomic affinity of the near-flightless Zapata Rail Cyanolimnas cerverai, a critically endangered and highly localized species endemic to Cuba, has long been debated. Morphological analyses have suggested that this species, which constitutes a monotypic genus, could be related either to the extinct Tahitian Cave Rails (Nesotrochis sp.) or to the South American rail tribe Pardirallini, i.e., the genera Neocrex, Mustelirallus, and Pardirallus. While pronounced phenotypic convergence—and divergence—among rails have repeatedly proven morphology-based phylogenies unreliable, thus far no attempt to sequence DNA from the enigmatic Cyanolimnas has succeeded. In this study, we extracted historic DNA from a museum specimen collected in 1927 and sequenced multiple short fragments that allowed us to assemble a partial sequence of the mitochondrial cytochrome oxidase I gene. Phylogenetic analyses confirm that Cyanolimnas belongs in tribe Pardirallini as sister to genus Neocrex, from which it diverged about 6 million years ago. Their divergence from Mustelirallus was estimated at about 9 million years ago. Based on morphology and our mitochondrial phylogeny, we conclude that it is unjustified to retain the monotypic genus Cyanolimnas and tentatively recommend that C. cerverai and the two Neocrex species are ascribed to genus Mustelirallus.

Original languageEnglish
Pages (from-to)945-952
Number of pages8
JournalJournal of Ornithology
Volume163
Issue number4
Early online date8 Jul 2022
DOIs
Publication statusPublished - Oct 2022

Bibliographical note

Funding Information:
GMK and AK are grateful to staff, particularly Ianela García-Lau, Manolo Barro and volunteers at the Museo de Historia Natural ‘Felipe Poey’, La Habana, Cuba, for access to relevant specimens. This study was funded by University of Aberdeen (AB) and The Sound Approach Ph.D. Studentship (TJS).

Data Availability Statement

The Zapata Rail COI sequence has been deposited at Genbank with accession number OL449772. Supporting material has been deposited at Zenodo and is available at https://doi.org/10.5281/zenodo.6500391. This includes Table S2 (taxon name, classification, and accession numbers for sequences included); sequence alignment nexus file; Beast xml input file; Beast output including maximum clade credibility tree files; log files and raw tree files; and IQtree consensus tree files.

Keywords

  • Cuba
  • Cytochrome oxidase I
  • Historic DNA
  • Mitochondrial phylogeny
  • Rallidae

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